STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2111Probable dihydrodipicolinate synthase (dhdps) protein; Belongs to the DapA family. (302 aa)    
Predicted Functional Partners:
dapB
Probable dihydrodipicolinate reductase (dhpr). oxidoreductase protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
 
 0.980
dapA-2
Probable dihydrodipicolinate synthase-related transmembrane protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
0.933
asd
Probable aspartate-semialdehyde dehydrogenase oxidoreductase protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.932
dapA
Probable dihydrodipicolinate synthase (dhdps) protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
0.930
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
 
  
 0.928
aldH
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
 
  
 0.834
RSc2113
Putative fad dependent oxidoreductase oxidoreductase protein.
 
   
 0.705
pheA
Probable bifunctional protein: chorismate mutase and prephenate dehydratase.
  
  
 0.594
RSc2112
Probable metabolite transport transmembrane protein.
       0.550
gatC
Probable glutamyl-trna(gln) amidotransferase subunit c (glu-adtsubunit c) protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
  
 0.546
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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