STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2117Probable transcription regulator protein. (250 aa)    
Predicted Functional Partners:
RSc2114
Probable transcription regulator protein.
  
     0.742
RSc2120
Putative predicted xylanase/chitin deacetylase protein.
 
     0.679
RSc2121
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.678
RSc2119
Probable chlorohydrolase protein.
 
     0.636
RSc2102
Probable transcription regulator protein.
  
  
 0.616
RSc2116
Hypothetical transthyretin-like protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.608
RSc1078
Probable transcriptional regulatory dna-binding transcription regulator protein.
  
  
 0.568
RSc2118
Putative xanthine permease transmembrane protein.
       0.535
RSc2122
Miscellaneous; hypothetical/partial homology.
       0.535
RSc0302
Probable transcription regulator protein.
  
  
 0.477
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.