STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2121Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (173 aa)    
Predicted Functional Partners:
RSc2116
Hypothetical transthyretin-like protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 0.999
RSc2120
Putative predicted xylanase/chitin deacetylase protein.
    0.995
RSc2118
Putative xanthine permease transmembrane protein.
  
 0.978
RSc2119
Probable chlorohydrolase protein.
 
     0.874
RSc2115
Probable transmembrane protein.
 
    0.868
xdhB
Probable xanthine dehydrogenase (subunit b) oxidoreductase protein.
 
     0.784
RSc2122
Miscellaneous; hypothetical/partial homology.
       0.773
guaD
Probable guanine deaminase (guanine aminohydrolase) (gah) protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.766
xdhA
Putative xanthine dehydrogenase (subunit a) oxidoreductase protein.
 
     0.755
xdhC
Probable xanthine dehydrogenase protein.
 
     0.733
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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