STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepNProbable aminopeptidase n (alpha-aminoacylpeptide hydrolase) metalloprotease protein. (905 aa)    
Predicted Functional Partners:
pepA
Probable cytosol aminopeptidase (leucine aminopeptidase)(lap) (leucyl aminopeptidase) protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 0.928
RSc0782
Probable cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
 
  
  0.918
RSp0532
Putative aminopeptidase transmembrane protein.
  
  
 
0.914
RSc0344
Hypothetical glutamate--cysteine ligase related protein.
   
 
 0.911
gshB
Probable glutathione synthetase (glutathione synthase) (gshsynthetase) (gsh-s) (gshase) protein.
    
 0.908
RSc2501
Putative gamma-glutamyltranspeptidase protein.
     
 0.905
ggt2
Probable gamma-glutamyltranspeptidase precursor protein.
     
 0.905
ggt1
Probable gamma-glutamyltranspeptidase signal peptide protein.
     
 0.905
RSc3298
Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
     
  0.900
metC
Putative cystathionine beta-lyase (cysteine lyase) protein.
 
 
 0.835
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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