STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dalKPutative d-arabinitol kinase protein. (491 aa)    
Predicted Functional Partners:
dalD
Putative d-arabinitol 4-dehydrogenase. oxidoreductase protein; Belongs to the mannitol dehydrogenase family.
 
  
 0.987
rpe
Probable ribulose-phosphate 3-epimerase protein; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.945
dalR
Putative transcriptional regulator (repressor) transcription regulator protein.
 
  
 0.873
tex
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      
 0.735
glpD
Probable glycerol-3-phosphate dehydrogenase oxidoreductase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.651
RSp1011
Probable threonine dehydrogenase or related zn-dependent dehydrogenase oxidoreductase protein.
  
  
 0.608
tal
Probable transaldolase protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.589
xylF
Probable d-xylose-binding periplasmic abc transporter protein.
 
   
 0.582
RSc2144
Probable sugar-binding periplasmic signal peptide protein.
 
   
 0.573
gntP
Probable high-affinity gluconate transporter (gnt-III system) transmembrane protein.
 
  
 0.560
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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