STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dalDPutative d-arabinitol 4-dehydrogenase. oxidoreductase protein; Belongs to the mannitol dehydrogenase family. (465 aa)    
Predicted Functional Partners:
dalK
Putative d-arabinitol kinase protein.
 
 
 0.987
RSp1280
Probable sugar kinase protein.
    
 0.948
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
  
 
 0.944
scrK
Probable fructokinase protein.
    
 0.941
fruB
Probable multiphosphoryl transfer protein mtp.
  
  
 0.936
RSc2144
Probable sugar-binding periplasmic signal peptide protein.
 
  
 0.758
dalR
Putative transcriptional regulator (repressor) transcription regulator protein.
 
   
 0.753
uxaA
Putative altronate hydrolase (altronic acid hydratase) protein.
  
 0.722
RSc2142
Probable transmembrane abc transporter protein.
 
  
 0.706
scrB
Putative sucrose-6-phosphate hydrolase (sucrase invertase) protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
      
 0.673
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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