STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2144Probable sugar-binding periplasmic signal peptide protein. (441 aa)    
Predicted Functional Partners:
RSc2143
Probable transmembrane abc transporter protein.
 0.997
RSc2142
Probable transmembrane abc transporter protein.
 
 0.994
RSc2140
Probable sugar atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.966
sorD
Probable sorbitol dehydrogenase (l-iditol 2-dehydrogenase) oxidoreductase protein.
 
    0.831
RSc3049
Probable transmembrane abc transporter protein.
 
 
 0.791
ugpE
Probable sn-glycerol-3-phosphate transmembrane abc transporter protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 
 0.757
dalR
Putative transcriptional regulator (repressor) transcription regulator protein.
 
     0.748
RSc3048
Probable sugar abc transporter, permease abc transporter protein.
 
 
 0.741
dalD
Putative d-arabinitol 4-dehydrogenase. oxidoreductase protein; Belongs to the mannitol dehydrogenase family.
 
    0.734
ugpA
Probable sn-glycerol-3-phosphate transmembrane abc transporter protein.
  
 
 0.710
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.