STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sorDProbable sorbitol dehydrogenase (l-iditol 2-dehydrogenase) oxidoreductase protein. (256 aa)    
Predicted Functional Partners:
RSc2144
Probable sugar-binding periplasmic signal peptide protein.
 
     0.830
scrK
Probable fructokinase protein.
   
   0.786
agaZ
Putative tagatose 6-phosphate kinase protein.
       0.773
RSp0697
Probable dehydrogenase/reductase oxidoreductase protein.
  
     0.767
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.749
RSc2142
Probable transmembrane abc transporter protein.
 
     0.673
RSc2143
Probable transmembrane abc transporter protein.
 
     0.651
RSp1422
Putative peptide synthetase protein.
  
 
 0.613
dalD
Putative d-arabinitol 4-dehydrogenase. oxidoreductase protein; Belongs to the mannitol dehydrogenase family.
   
 0.539
RSp0230
Putative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein.
  
     0.511
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.