STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2163Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (150 aa)    
Predicted Functional Partners:
RSc2516
Osmoprotectant transport system permease protein; Putative abc type transporter : periplasmic glycine betaine / choline-binding lipoprotein and permease components transmembrane.
  
    0.494
bfr
Probable bacterioferritin bfr (cytochrome b-1) (cytochrome b-557) protein; Iron-storage protein.
   
  
 0.474
RSp0238
Probable pula pullulanase related glycosidase protein; Belongs to the glycosyl hydrolase 13 family.
   
    0.468
RSp0240
Putative glycosidase possibly involved in trehalose metabolism protein.
   
    0.468
addB
Probable homologous recombinational repair protein.
  
     0.441
RSp1664
Putative ribonuclease rnase bn (rbn) transmembrane protein.
 
    0.432
RSc2162
Probable cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III protein.
       0.408
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.