STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2181Putative predicted fe-s oxidoreductases protein. (355 aa)    
Predicted Functional Partners:
RSc2180
Putative transmembrane protein.
       0.773
RSc2182
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSc2178
Hypothetical protein; Miscellaneous; unknown.
       0.762
RSc2179
Probable transmembrane protein.
       0.762
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.619
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
  
  
 0.618
RSp1422
Putative peptide synthetase protein.
     
 0.492
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
     
 0.486
RSc2183
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.448
RSc2295
Hypothetical signal peptide protein.
  
     0.446
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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