Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc0478 | dnaK | RSc0478 | RSc2635 | Probable composite atp-binding transmembrane abc transporter protein. | Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family. | 0.520 |
| RSc0478 | hscC | RSc0478 | RSp0521 | Probable composite atp-binding transmembrane abc transporter protein. | Probable chaperone transmembrane protein; Belongs to the heat shock protein 70 family. | 0.427 |
| RSc0478 | lpxK | RSc0478 | RSc2530 | Probable composite atp-binding transmembrane abc transporter protein. | Probable tetraacyldisaccharide 4'-kinase (lipid a 4'-kinase) protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.609 |
| RSc0478 | msbA | RSc0478 | RSc2200 | Probable composite atp-binding transmembrane abc transporter protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.679 |
| RSc1810 | RSp0641 | RSc1810 | RSp0641 | Probable polyketide synthase protein. | Probable non ribosomal peptide synthetase protein. | 0.998 |
| RSc1810 | RSp1422 | RSc1810 | RSp1422 | Probable polyketide synthase protein. | Putative peptide synthetase protein. | 0.999 |
| RSc1810 | msbA | RSc1810 | RSc2200 | Probable polyketide synthase protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.723 |
| RSc2199 | msbA | RSc2199 | RSc2200 | Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.619 |
| RSp0292 | msbA | RSp0292 | RSc2200 | Probable typeIsecretion system, atp-binding transmembrane abc transporter protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.676 |
| RSp0641 | RSc1810 | RSp0641 | RSc1810 | Probable non ribosomal peptide synthetase protein. | Probable polyketide synthase protein. | 0.998 |
| RSp0641 | RSp1422 | RSp0641 | RSp1422 | Probable non ribosomal peptide synthetase protein. | Putative peptide synthetase protein. | 0.998 |
| RSp0641 | dnaK | RSp0641 | RSc2635 | Probable non ribosomal peptide synthetase protein. | Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family. | 0.459 |
| RSp0641 | hscC | RSp0641 | RSp0521 | Probable non ribosomal peptide synthetase protein. | Probable chaperone transmembrane protein; Belongs to the heat shock protein 70 family. | 0.459 |
| RSp0641 | msbA | RSp0641 | RSc2200 | Probable non ribosomal peptide synthetase protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.652 |
| RSp1182 | msbA | RSp1182 | RSc2200 | Putative typeIsecretion system, atp-binding transmembrane abc transporter protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.665 |
| RSp1422 | RSc1810 | RSp1422 | RSc1810 | Putative peptide synthetase protein. | Probable polyketide synthase protein. | 0.999 |
| RSp1422 | RSp0641 | RSp1422 | RSp0641 | Putative peptide synthetase protein. | Probable non ribosomal peptide synthetase protein. | 0.998 |
| RSp1422 | msbA | RSp1422 | RSc2200 | Putative peptide synthetase protein. | Probable lipid a export atp-binding/permease msba. abc transporter protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.683 |
| dnaK | RSc0478 | RSc2635 | RSc0478 | Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family. | Probable composite atp-binding transmembrane abc transporter protein. | 0.520 |
| dnaK | RSp0641 | RSc2635 | RSp0641 | Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family. | Probable non ribosomal peptide synthetase protein. | 0.459 |
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