STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2207Putative flavodoxin/nitric oxide synthase; protein. (190 aa)    
Predicted Functional Partners:
wrbA
Probable trp repressor binding protein; Belongs to the WrbA family.
  
  
 
0.927
ubiE
Probable ubiquinone/menaquinone biosynthesis methyltransferase ubie protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
RSc2346
Miscellaneous; hypothetical/partial homology.
     
  0.900
RSp0844
Putative nucleoside-diphosphate-sugar epimerase protein.
    
  0.900
RSc2208
Probable pirin-related protein; Belongs to the pirin family.
 
     0.617
dps
Putative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.536
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
 
    0.512
katE
Probable catalase hydroperoxidase hpII oxidoreductase protein; Belongs to the catalase family.
  
  
 0.473
RSc2148
Hypothetical peptidoglycan-binding lysm protein.
   
  
 0.453
RSc0069
Probable signal peptide protein.
   
  
 0.438
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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