STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2224Putative bacterial ring hydroxylating dioxygenase, alpha subunit; EC_number 1.14.1.-. (365 aa)    
Predicted Functional Partners:
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
  
 
 0.854
RSc2434
Putative reductase oxidoreductase protein.
 
  
 0.748
priB
Probable primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
 
     0.691
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
  
 0.687
RSc2779
Putative ribonuclease protein.
  
     0.683
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.678
RSp0057
Putative 4-vinyl reductase motif harboring protein.
   
    0.671
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.667
sspA
Probable stringent starvation a transcription regulator protein.
  
   
 0.645
slt
Probable soluble lytic murein transglycosylase precursor transmembrane protein.
      
 0.644
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.