STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBProbable homoserine kinase (hsk) (hk) protein; Belongs to the pseudomonas-type ThrB family. (334 aa)    
Predicted Functional Partners:
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
 
  
 0.930
thrC
Probable threonine synthase protein.
    
 0.922
metC
Putative cystathionine beta-lyase (cysteine lyase) protein.
  
  
  0.830
RSc1840
Putative aminotransferase protein.
   
 
  0.810
ilvE
Probable branched-chain amino acid aminotransferase protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.809
ilvE3
Probable branched-chain amino acid aminotransferase protein.
     
 0.809
RSc2234
Probable transmembrane protein.
       0.806
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
     
 0.806
ahcY
Probable adenosylhomocysteinase (s-adenosyl-l-homocysteinehydrolase) (adohcyase) protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
  0.803
metY
Probable o-acetylhomoserine (thiol)-lyase (methionine/homocysteine synthase) protein.
    
  0.803
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.