STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galU1Probable utp--glucose-1-phosphate uridylyltransferase protein. (289 aa)    
Predicted Functional Partners:
RSc0691
Putative phosphomannomutase or phosphoglucomutase protein.
  
 0.966
ugd
Probable udp-glucose 6-dehydrogenase (ugd) oxidoreductase protein.
 
 0.962
galE
Probable udp-glucose 4-epimerase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.951
rfbA
Probable glucose-1-phosphate thymidylyltransferase protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
0.944
RSp0731
Probable trehalose-6-phosphate synthase (alpha,alpha-trehalose-phosphate synthase udp-forming) protein.
    
 0.913
otsA
Probable alpha,alpha-trehalose-phosphate synthase protein; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
    
 0.913
malQ
Probable 4-alpha-glucanotransferase (amylomaltase) protein.
     
 0.910
galU2
Probable utp--glucose-1-phosphate uridylyltransferase udp-glucose pyrophosphorylase protein.
  
  
 
0.901
valS
Probable valyl-trna synthetase (valine--trna ligase) protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.661
uvrD
Probable dna helicase II protein.
      0.557
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.