STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2261Putative amino-acid-binding periplasmic (pbp) abc transporter protein. (308 aa)    
Predicted Functional Partners:
gltJ
Probable glutamate/aspartate transmembrane abc transporter protein.
   0.834
gltK
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 
 0.826
gltL
Putative glutamate/aspartate transport atp-binding abc transporter protein.
 
 0.806
RSc2258
Probable amino acid transmembrane abc transporter protein.
   0.682
RSp0428
Putative pseudogene protein.
 
 
 0.585
dadA2
Probable d-amino acid dehydrogenase 2 small subunit. oxidoreductase protein; Oxidative deamination of D-amino acids.
  
    0.584
RSp0934
Probable amino acid transmembrane abc transporter protein.
   0.560
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
 0.557
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 
 0.555
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 
 0.524
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.