STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2263Probable lipoprotein. (391 aa)    
Predicted Functional Partners:
RSp1029
Putative transmembrane acyl-coa desaturase (fatty acid desaturase) oxidoreductase protein.
  
     0.731
tzs
Isopentenyl transferase protein; Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones; Belongs to the isopentenyl transferase family.
  
     0.731
RSp1137
Putative rhs-related transmembrane protein.
 
     0.682
RSp1283
Putative lamb type porin transmembrane protein.
  
     0.678
RSc3426
Probable transmembrane protein.
  
     0.648
RSc2264
Probable lipoprotein.
       0.642
RSc0648
Putative transmembrane protein.
  
     0.613
RSp0881
Putative glycosyl hydrolase transmembrane protein.
  
     0.596
RSp1030
Probable cog3687, predicted metal-dependent hydrolase protein.
  
     0.581
RSp0926
Putative outer membrane cation efflux protein.
  
     0.580
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.