STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ragDProbable polysaccharide transport system component transmembrane protein. (483 aa)    
Predicted Functional Partners:
ragC
Probable outer membrane lipoprotein.
  
  
 0.893
ragE
Probable polysaccharide transport system component transmembrane protein.
  
  
 0.844
ragG
Probable polysaccharide synthase transmembrane protein.
     
 0.842
ragF
Probable glycosyl-transfrase protein.
  
  
 0.809
ragB
Probable polysaccharide transport system component signal peptide protein.
     
 0.724
ragA
Probable polysaccharide transport system component signal peptide protein.
     
 0.700
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
  
 
 0.551
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
   
 
 0.523
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
     
 0.490
RSc2269
Hypothetical signal peptide protein.
       0.471
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.