STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2294Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (278 aa)    
Predicted Functional Partners:
RSc2297
Hypothetical signal peptide protein.
 
     0.866
RSc2298
Putative multicopper oxidase, type 3; signal peptide protein.
 
     0.753
RSc2295
Hypothetical signal peptide protein.
 
    
0.736
RSc2299
Putative multicopper oxidase, type 2; signal peptide protein.
 
     0.705
RSc1117
Probable lipoprotein releasing system transmembrane.
   
 
 0.644
RSc2296
Putative transmembrane protein.
       0.586
lolD
Probable lipoprotein-releasing system atp-binding lold. abc transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.577
RSp1464
Probable abc-type transport system, atpase component abc transporter protein.
   
 
 0.577
amiC
Probable n-acetylmuramoyl-l-alanine amidase amic precursor protein.
    
   0.550
RSc2293
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.547
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.