STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2299Putative multicopper oxidase, type 2; signal peptide protein. (501 aa)    
Predicted Functional Partners:
RSc2298
Putative multicopper oxidase, type 3; signal peptide protein.
 
   
 0.987
RSc2297
Hypothetical signal peptide protein.
     0.932
RSc2295
Hypothetical signal peptide protein.
 
   
 0.766
copB
Probable copper resistance protein b.
 
  
 0.764
RSc2296
Putative transmembrane protein.
       0.713
RSc2294
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.705
RSc2292
Putative transmembrane protein.
 
   
 0.611
RSc2300
Putative cog2165, type II secretory pathway, pseudopilin pulg-related signal peptide protein.
       0.459
RSp0641
Probable non ribosomal peptide synthetase protein.
   
  
 0.417
copA
Probable copper resistance transmembrane protein.
  
     0.415
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.