STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2305Probable transmembrane protein. (188 aa)    
Predicted Functional Partners:
RSc2303
Probable type II secretory pathway, gspd-related protein.
  
 
 0.850
RSc2308
Probable type II secretory pathway gspe-related protein.
  
 
 0.834
RSc2309
Probable type II secretory pathway, gspf-related transmembrane protein.
   
 
 0.832
pilN
Probable fimbrial type-4 assembly membrane transmembrane protein.
  
 
 0.804
RSc2306
Probable transmembrane protein.
  
    0.786
RSc2307
Probable signal peptide protein.
       0.773
RSc2302
Probable cog2165, type II secretory pathway, pseudopilin pulg-related signal peptide protein.
  
  
 0.765
RSc2301
Probable cog2165, type II secretory pathway, pseudopilin pulg-related protein.
  
  
 0.760
RSc2304
Putative proline rich transmembrane protein.
       0.758
pilP
Probable fimbrial type-4 assembly lipoprotein.
  
 
 0.723
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.