STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2312Probable two-component response regulator transcription regulator protein. (238 aa)    
Predicted Functional Partners:
RSc0191
Probable transmembrane two component system sensor kinase transcription regulator protein.
 
 0.854
vsrA
Transmembrane sensor kinase vsra transcription regulator protein.
 
 
 0.839
RSc2311
Putative two-component sensor histidine kinase transcription regulator protein.
 
 0.838
RSc3160
Probable two component sensor histidine kinase transcription regulator protein.
 
 
 0.791
RSc0021
Probable transmembrane sensor histidine kinase transcription regulator protein.
   
 0.773
epsR
Negative regulator of exopolysaccharide production transcription regulator protein.
  
     0.773
RSp0285
Probable transcription regulator protein.
  
     0.745
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.711
narX
Putative transmembrane nitrate/nitrite sensor kinase transcription regulator protein.
 
 
 0.595
RSp1141
Probable transcription regulator protein.
  
     0.537
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.