Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc2321Probable short-chain dehydrogenase/reductase sdr; oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
RSc1806
Probable polyketide synthase protein.
 
 
 0.805
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 
 0.736
RSc1730
Probable short-chain dehydrogenase/reductase sdr oxidoreductase protein.
  
 
   0.603
RSp1422
Putative peptide synthetase protein.
 
  
 0.583
RSc2504
Probable short-chain dehydrogenase/reductase sdr; oxidoreductase protein.
  
 
   0.580
fabG2
Probable 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase.
  
 
   0.576
RSc1838
Probable oxidoreductase protein.
  
 
   0.555
RSc2322
Probable transcription regulator protein.
       0.548
phbB
Probable acetoacetyl-coa reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.537
RSc1810
Probable polyketide synthase protein.
 
 
 0.507
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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