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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2324Putative transport transmembrane protein. (475 aa)    
Predicted Functional Partners:
RSc1473
Putative multidrug resistance-like transmembrane protein.
  
     0.743
RSp1278
Probable transporter transmembrane protein; Belongs to the major facilitator superfamily.
  
     0.697
RSc2323
Probable transporter transmembrane protein.
 
    
0.637
RSc2325
Probable transcription regulator protein.
 
     0.586
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 
 0.488
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 
 0.462
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 
 0.458
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.434
RSp1422
Putative peptide synthetase protein.
 
  
 0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.