STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2328Putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) signal peptide protein. (259 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
RSc0220
Probable mannose-6-phosphate isomerase protein.
  
     0.538
RSc2327
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
       0.532
RSp0911
Putative salicylate hydroxylase oxidoreductase protein.
  
   0.478
RSc1806
Probable polyketide synthase protein.
  
 0.463
RSc2329
Putative nad(p)h dehydrogenase (quinone); protein.
       0.449
RSc1810
Probable polyketide synthase protein.
  
 0.442
RSp0438
Probable hydrolase protein.
  
   0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.