STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2346Miscellaneous; hypothetical/partial homology. (208 aa)    
Predicted Functional Partners:
coq7
Probable ipr011566 ubiquinone biosynthesis and related protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 
 0.906
ubiH
Probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein.
   
 
 0.901
ubiE
Probable ubiquinone/menaquinone biosynthesis methyltransferase ubie protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
wrbA
Probable trp repressor binding protein; Belongs to the WrbA family.
     
  0.900
RSc2207
Putative flavodoxin/nitric oxide synthase; protein.
     
  0.900
RSp0844
Putative nucleoside-diphosphate-sugar epimerase protein.
    
  0.900
nadE
Probable nh3-dependent nad+ synthetase signal peptide protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
   0.772
glnB
Probable nitrogen regulatory p-II transcription regulator protein; Belongs to the P(II) protein family.
       0.741
RSc2348
Hypothetical protein of unknown function duf482.
       0.548
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.508
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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