STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2352Probable permease transmembrane protein. (442 aa)    
Predicted Functional Partners:
RSc2353
Probable signal peptide protein.
       0.479
tsaC
Probable toluenesulfonate zinc-independent alcohol dehydrogenase oxidoreductase protein.
       0.476
RSp0234
Probable metabolite transport transmembrane protein.
  
     0.453
RSp1595
Probable metabolite transport transmembrane protein.
  
     0.435
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.429
RSc2354
Probable cytochrome b oxidoreductase protein.
       0.426
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
       0.416
RSp1422
Putative peptide synthetase protein.
     
 0.405
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.