STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2370Putative formate dehydrogenase, gamma subunit; transmembrane protein. (384 aa)    
Predicted Functional Partners:
RSc2372
Probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein.
 
 0.999
RSc2373
Probable formate dehydrogenase (large subunit) oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.998
RSc2376
Putative ferredoxin protein.
 
 
 0.985
RSc2375
Putative cytoplasmic chaperone tord; protein.
 
  
 0.902
RSc0604
Probable hydrolase oxidoreductase protein; Serine hydrolase involved in the detoxification of formaldehyde.
     
  0.900
kynB
Probable kynurenine formidase protein; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
     
  0.900
purU3
Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
purU1
Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
fdhA
Probable glutathione-independent formaldehyde dehydrogenase oxidoreductase protein.
     
  0.900
purU2
Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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