STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2377Proline rich protein. (189 aa)    
Predicted Functional Partners:
RSc2378
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.984
RSc2376
Putative ferredoxin protein.
 
     0.931
RSc2375
Putative cytoplasmic chaperone tord; protein.
 
     0.921
RSc2370
Putative formate dehydrogenase, gamma subunit; transmembrane protein.
 
     0.845
RSc2373
Probable formate dehydrogenase (large subunit) oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.839
RSc2372
Probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein.
 
     0.837
mrp
Probable mrp atpase involved in chromosome partitioning protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
    0.803
fdhD-2
Probable fdhd protein homolog; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.752
addB
Probable homologous recombinational repair protein.
  
     0.666
RSc2093
Probable abc-type tungstate transport system, permease component abc transporter protein.
 
     0.664
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.