STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2384Putative outer membrane protein. (589 aa)    
Predicted Functional Partners:
RSc2383
Putative transmembrane protein.
 
 0.994
RSc2382
Probable lipoprotein.
     
 0.568
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.561
RSc2385
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.544
RSc2400
Probable tonb-dependent receptor protein.
  
     0.487
RSc1355
Hypothetical protein of unknown function upf0131.
 
   
 0.476
RSc2760
Probable ipr001702 outer membrane (porin) signal peptide protein.
  
     0.473
dsbC
Probable thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
   
 0.440
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.431
hemY
Putative protein porphyrin biosynthesis.
 
     0.429
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.