STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2384Putative outer membrane protein. (589 aa)    
Predicted Functional Partners:
RSc2383
Putative transmembrane protein.
 
 
 0.997
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.561
RSc2382
Probable lipoprotein.
     
 0.549
RSc2385
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.543
RSc2356
Probable bifunctional: uroporphyrin-III c-methyltransferase and uroporphyrinogen-III synthase transmembrane protein.
 
     0.509
RSc2218
Putative flavoprotein transmembrane.
  
    0.498
RSc2400
Probable tonb-dependent receptor protein.
  
     0.487
RSc2760
Probable ipr001702 outer membrane (porin) signal peptide protein.
  
     0.473
RSc2671
Putative enzyme related to lactoylglutathione lyase protein.
   
    0.471
RSc1355
Hypothetical protein of unknown function upf0131.
 
   
 0.449
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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