STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2398Probable atp-binding abc transporter protein. (279 aa)    
Predicted Functional Partners:
RSc2399
Probable transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
RSc2394
Probable abc-type transporter, periplasmic component abc transporter protein.
 
 
 0.973
RSp0243
Probable hemin transport protein.
   
 0.935
cobQ
Probable cobyric acid synthase protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 0.925
RSc0283
Putative abc-type fe3+-hydroxamate transport system, periplasmic component abc transporter protein.
 
 
 0.921
RSc2400
Probable tonb-dependent receptor protein.
 
   
 0.895
cbiD
Putative cobalt-precorrin-6a synthase [deacetylating]. transmembrane protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
    
 0.830
RSp1422
Putative peptide synthetase protein.
  
  
 0.825
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
  
 0.633
RSc1811
Putative siderophore synthetase protein.
  
  
 0.572
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.