STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2411Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
lgt
Probable prolipoprotein diacylglyceryl transferase. transmembrane; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.752
RSc0325
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.732
RSp1237
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.725
RSc1196
Probable dna-binding transcriptional regulatory transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.724
RSc0615
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.689
RSp1571
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.689
RSp0018
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.683
RSp0535
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.663
RSp0308
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.655
RSc1472
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.637
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.