STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2418Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (123 aa)    
Predicted Functional Partners:
cbiL
Probable precorrin-2 c20-methyltransferase protein; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
  
 0.931
RSc2416
Putative permease transmembrane protein.
  
    0.827
RSc2417
Putative permease transmembrane protein.
  
    0.823
pepA
Probable cytosol aminopeptidase (leucine aminopeptidase)(lap) (leucyl aminopeptidase) protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.606
nirE
Putative uroporphyrinogen-III c-methyltransferase protein; Belongs to the precorrin methyltransferase family.
 
  
 0.606
holC
Probable dna polymerase III (chi subunit) protein.
       0.553
cbiJH
Probable bifunctional: precorrin-3 methyltransferase and precorrin-6x reductase oxidoreductase protein.
     
 0.511
cysD
Putative sulfate adenylyltransferase subunit 2 protein.
 
  
 0.510
RSc2413
Miscellaneous; hypothetical/partial homology.
       0.491
narH
Probable respiratory nitrate reductase oxidoreductase protein.
  
    0.452
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.