STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2432Putative signal transduction ggdef domain transmembrane protein. (551 aa)    
Predicted Functional Partners:
RSc3387
Probable two-component response regulator with eal domain transcription regulator protein.
 
 
 0.830
RSp1051
Probable signal transduction protein eal domain.
 
 
 
 0.806
RSp1208
Probable signal transduction protein eal-ggdef domains.
 
   
 0.798
RSp1623
Putative response regulator with eal domain protein.
 
   
 0.779
RSc2433
Putative nad-dependent epimerase/dehydratase protein.
       0.773
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
 
0.669
flgD
Probable basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.586
RSp0281
Putative signal transduction protein ggdef domain.
  
     0.585
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.561
RSc2434
Putative reductase oxidoreductase protein.
       0.559
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.