Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplL | rplM | RSc3035 | RSc0490 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
| rplL | rplU | RSc3035 | RSc2822 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal subunit protein l21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| rplL | rplW | RSc3035 | RSc3017 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal subunit protein l23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.992 |
| rplL | rpmB | RSc3035 | RSc2445 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family. | 0.990 |
| rplL | rpmE | RSc3035 | RSc1182 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal protein l31 type b. | 0.974 |
| rplL | rpmF | RSc3035 | RSc1048 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 550s ribosomal protein l32; Belongs to the bacterial ribosomal protein bL32 family. | 0.992 |
| rplL | rpmG | RSc3035 | RSc2446 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 50s ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family. | 0.992 |
| rplL | rpsI | RSc3035 | RSc0491 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 30s ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
| rplL | rpsN | RSc3035 | RSc3006 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 30s ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.; Belongs to the universal ribosomal protein uS14 family. | 0.993 |
| rplL | rpsR | RSc3035 | RSc1309 | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | Probable 30s ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.; Belongs to the bacterial ribosomal protein bS18 family. | 0.990 |
| rplM | rplL | RSc0490 | RSc3035 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal protein l7/l12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.; Belongs to the bacterial ribosomal protein bL12 family. | 0.996 |
| rplM | rplU | RSc0490 | RSc2822 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal subunit protein l21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| rplM | rplW | RSc0490 | RSc3017 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal subunit protein l23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.998 |
| rplM | rpmB | RSc0490 | RSc2445 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family. | 0.991 |
| rplM | rpmE | RSc0490 | RSc1182 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal protein l31 type b. | 0.990 |
| rplM | rpmF | RSc0490 | RSc1048 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 550s ribosomal protein l32; Belongs to the bacterial ribosomal protein bL32 family. | 0.990 |
| rplM | rpmG | RSc0490 | RSc2446 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 50s ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family. | 0.991 |
| rplM | rpsI | RSc0490 | RSc0491 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 30s ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsN | RSc0490 | RSc3006 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 30s ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.; Belongs to the universal ribosomal protein uS14 family. | 0.993 |
| rplM | rpsR | RSc0490 | RSc1309 | Probable 50s ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Probable 30s ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.; Belongs to the bacterial ribosomal protein bS18 family. | 0.993 |
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