STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vsrCResponse regulator vsrc transcription regulator protein. (221 aa)    
Predicted Functional Partners:
vsrA
Transmembrane sensor kinase vsra transcription regulator protein.
 
 
 0.937
vsrD
Response regulator transcription regulator protein.
  
   
 0.891
RSc0191
Probable transmembrane two component system sensor kinase transcription regulator protein.
 
 
 0.851
RSc2311
Putative two-component sensor histidine kinase transcription regulator protein.
 
 
 0.839
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 
 0.780
RSc3078
Probable response regulator transcription regulator protein.
  
    0.779
RSc3161
Probable two component response regulator transcription regulator protein.
  
     0.775
RSc0192
Probable response regulator transcription regulator protein.
  
     0.774
RSp0381
Probable transcription regulator protein.
  
     0.774
RSc3160
Probable two component sensor histidine kinase transcription regulator protein.
 
 
 0.770
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.