STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2460Putative transmembrane protein. (185 aa)    
Predicted Functional Partners:
RSp1168
Probable transmembrane protein.
  
     0.761
RSp1167
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.691
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.560
acpA
Putative acid phosphatase protein.
  
     0.523
dfp
Probable dna/pantothenate metabolism flavoprotein flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.515
RSc2462
Putative bacterial luciferase-likee oxidoreductase protein.
       0.515
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase (dutpase) (dutp pyrophosphatase) protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.515
RSc0450
Probable atp-sensitive inward rectifier potassium channel related transmembrane protein.
  
     0.506
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
  
     0.489
RSc3224
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.435
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.