STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2501Putative gamma-glutamyltranspeptidase protein. (552 aa)    
Predicted Functional Partners:
ggt2
Probable gamma-glutamyltranspeptidase precursor protein.
  
  
 
0.926
ggt1
Probable gamma-glutamyltranspeptidase signal peptide protein.
  
  
 
0.925
gshB
Probable glutathione synthetase (glutathione synthase) (gshsynthetase) (gsh-s) (gshase) protein.
    
 0.913
gor
Probable glutathione reductase oxidoreductase protein.
     
 0.911
pepA
Probable cytosol aminopeptidase (leucine aminopeptidase)(lap) (leucyl aminopeptidase) protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.911
RSc3298
Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.911
RSc0307
Probable glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
     
 0.909
RSc2674
Putative glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
     
 0.909
RSc2171
Putative allophanate hydrolase subunit 1 protein.
   
 
  0.908
pepN
Probable aminopeptidase n (alpha-aminoacylpeptide hydrolase) metalloprotease protein.
     
 0.905
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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