STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2510Probable trap-type c4-dicarboxylate transport system, periplasmic component signal peptide protein. (338 aa)    
Predicted Functional Partners:
RSc2166
Putative trap dicarboxylate transporter-dctp subunit; signal peptide protein.
  
  
 
0.926
RSc1958
Hypothetical cupin domain harboring protein.
  
     0.590
RSc0035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 
 0.580
RSc1721
Probable transcription regulator protein.
 
     0.544
RSc2509
Hypothetical protein; Miscellaneous; unknown.
       0.529
RSc2511
Hypothetical signal peptide protein.
       0.505
RSc2512
Putative cyclohexadienyl dehydratase precursor signal peptide protein; Belongs to the bacterial solute-binding protein 3 family.
 
   
 0.487
RSc2963
Hypothetical uncharacterized protein upf0065; Miscellaneous; hypothetical/global homology.
  
     0.450
RSc3088
Putative signal peptide protein.
  
     0.429
RSc2316
Putative drug transport transmembrane protein.
  
     0.424
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.