STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2512Putative cyclohexadienyl dehydratase precursor signal peptide protein; Belongs to the bacterial solute-binding protein 3 family. (267 aa)    
Predicted Functional Partners:
pheA
Probable bifunctional protein: chorismate mutase and prephenate dehydratase.
    
 0.913
tyrA
Putative prephenate dehydrogenase oxidoreductase protein.
    
 0.909
tyrB
Probable aromatic-amino-acid aminotransferase protein.
     
 0.902
aspC
Probable aspartate aminotransferase protein.
   
 
  0.902
RSp0197
Putative chorismate mutase protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
     
 0.902
aatA2
Probable aspartate aminotransferase a protein.
   
 
  0.902
aatA1
Probable aspartate aminotransferase a protein.
   
 
  0.902
hisC2
Probable histidinol-phosphate aminotransferase 2 (imidazoleacetol-phosphate transaminase 2) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.901
hisC1
Probable histidinol-phosphate aminotransferase 1 (imidazoleacetol-phosphate transaminase 1) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.901
phhA
Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein.
     
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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