STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2515Putative metal-dependent phosphohydrolase, hd region; protein. (402 aa)    
Predicted Functional Partners:
RSc3143
Putative signal transduction ggdef domain transmembrane protein.
 
 0.943
RSp1203
Probable signal transduction protein ggdef domain.
 
 0.936
RSp0398
Putative signal transduction ggdef domain transmembrane protein.
   
 0.917
RSp0519
Putative signal transduction ggdef domain transmembrane protein.
 
 
 0.855
RSc1893
Putative signal transduction ggdef domain transmembrane protein.
 
 0.833
RSp1524
Putative signal transduction ggdef domain transmembrane protein.
 
 0.786
RSp0400
Putative signal transduction ggdef domain transmembrane protein.
   
 0.782
RSc2516
Osmoprotectant transport system permease protein; Putative abc type transporter : periplasmic glycine betaine / choline-binding lipoprotein and permease components transmembrane.
       0.773
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
 0.771
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 0.732
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.