STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2518Putative h+/gluconate symporter and related permeases transmembrane protein. (466 aa)    
Predicted Functional Partners:
lpsI
Probable fesuccinyl-coa:3-ketoacid-coenzyme a transferase subunit a protein.
    0.585
RSc0471
Putative coenzyme a transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
 
     0.537
RSc2519
Hypothetical protein; Miscellaneous; unknown.
       0.495
lpsJ
Probable succinyl-coa:3-ketoacid-coenzyme a transferase subunit b protein.
 
    0.484
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
  
   
 0.450
dalK
Putative d-arabinitol kinase protein.
  
  
 0.448
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
     
 0.411
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.