STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aacProbable acyl-homoserine lactone acylase transmembrane protein. (795 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.774
RSp0779
Probable autoinducer synthase (acyl homoserine lactone synthase) protein.
      
 0.757
RSp1422
Putative peptide synthetase protein.
 
  
 0.751
solI
Autoinducer synthesis protein soli; Required for the synthesis of acyl-HSL autoinducers that bind to SolR.
      
 0.750
RSp0165
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.680
RSp0640
Probable decoration of polyketide or non ribosomal peptide protein.
 
    0.667
RSp0642
Probable non ribosomal peptide synthetase protein.
 
  
 0.643
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
  
 0.581
RSc1811
Putative siderophore synthetase protein.
 
  
 0.563
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
      
 0.550
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.