STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2571Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (89 aa)    
Predicted Functional Partners:
RSc2567
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.847
ada
Probable ada regulatory of adaptative response contains: methylated-dna--protein-cysteine methyltransferase ec 2.1.1.63 o-6-methylguanine-dna transcription regulator.
  
  
 0.838
ogt
Probable methylated-dna--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
 
  
 0.684
alkB
Probable alkylated dna repair protein.
 
  
 0.675
RSc2572
Probable lipoprotein.
       0.642
RSc2566
Putative methylated-dna--protein-cysteine methyltransferase.
  
  
 0.639
alkA
Probable dna-3-methyladenine glycosylase protein.
     
 0.588
RSc1120
Hypothetical transmembrane protein.
     
 0.448
tISRso15
Isrso15-transposase protein.
       0.436
RSc2565
Putative acetyltransferase protein.
  
    0.417
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.