Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc2585 | traG | RSc2585 | RSc2586 | Hypothetical ribbon-helix-helix harboring protein. | Probable plasmid conjugation trag transmembrane protein. | 0.993 |
RSc2585 | trbB | RSc2585 | RSc2584 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer protein trbb. | 0.988 |
RSc2585 | trbC | RSc2585 | RSc2583 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer trbc transmembrane protein. | 0.954 |
RSc2585 | trbD | RSc2585 | RSc2582 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer trbd transmembrane protein. | 0.954 |
RSc2585 | trbE | RSc2585 | RSc2581 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer protein trbe. | 0.951 |
RSc2585 | trbF | RSc2585 | RSc2577 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer trbf transmembrane protein. | 0.929 |
RSc2585 | trbG | RSc2585 | RSc2576 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer lipoprotein trbg. | 0.929 |
RSc2585 | trbI | RSc2585 | RSc2575 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer trbi transmembrane protein. | 0.929 |
RSc2585 | trbJ | RSc2585 | RSc2580 | Hypothetical ribbon-helix-helix harboring protein. | Probable conjugal transfer trbj signal peptide protein. | 0.951 |
RSc2585 | trbL | RSc2585 | RSc2578 | Hypothetical ribbon-helix-helix harboring protein. | Putative conjugal transfer trbl transmembrane protein. | 0.948 |
traG | RSc2585 | RSc2586 | RSc2585 | Probable plasmid conjugation trag transmembrane protein. | Hypothetical ribbon-helix-helix harboring protein. | 0.993 |
traG | trbB | RSc2586 | RSc2584 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer protein trbb. | 0.994 |
traG | trbC | RSc2586 | RSc2583 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer trbc transmembrane protein. | 0.975 |
traG | trbD | RSc2586 | RSc2582 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer trbd transmembrane protein. | 0.954 |
traG | trbE | RSc2586 | RSc2581 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer protein trbe. | 0.968 |
traG | trbF | RSc2586 | RSc2577 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer trbf transmembrane protein. | 0.929 |
traG | trbG | RSc2586 | RSc2576 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer lipoprotein trbg. | 0.978 |
traG | trbI | RSc2586 | RSc2575 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer trbi transmembrane protein. | 0.978 |
traG | trbJ | RSc2586 | RSc2580 | Probable plasmid conjugation trag transmembrane protein. | Probable conjugal transfer trbj signal peptide protein. | 0.959 |
traG | trbL | RSc2586 | RSc2578 | Probable plasmid conjugation trag transmembrane protein. | Putative conjugal transfer trbl transmembrane protein. | 0.953 |
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