STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2617Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (597 aa)    
Predicted Functional Partners:
RSc2618
Putative f plasmid gene 32-like protein.
 
    0.898
parA3
Putative partition protein.
 
 
 0.864
RSc2609
Probable lipoprotein.
 
     0.798
trbI
Probable conjugal transfer trbi transmembrane protein.
 
   
 0.785
traF
Probable conjugal transfer traf transmembrane protein.
 
     0.779
RSc2613
Hypothetical protein of unknown function duf736.
 
     0.778
RSc2601
Putative type iv secretory pathway vird2 (relaxase)-related protein.
  
     0.774
RSc2603
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.774
RSc2607
Putative dna binding protein.
 
     0.774
RSc2585
Hypothetical ribbon-helix-helix harboring protein.
  
     0.773
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.