STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2624Probable permease transmembrane transport protein. (356 aa)    
Predicted Functional Partners:
purC
Probable phosphoribosylaminoimidazole-succinocarboxamide synthase (saicar synthetase) protein.
      0.880
RSc2625
Putative cog0593, atpase involved in dna replication initiation protein.
  
  
 0.801
pcnB
Probable polynucleotide adenylyltransferase protein; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
    0.681
RSc2626
Probable had-superfamily subfamily ib, pspase-like; protein.
       0.637
purM
Probable phosphoribosylformylglycinamidine cyclo-ligase (airs)(phosphoribosyl-aminoimidazole synthetase) (air synthase) protein.
       0.635
folK
Probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase protein.
       0.623
RSc2629
Putative deoxyguanosine kinase (dguo kinase) (dgk) protein.
       0.528
RSp1522
Probable transmembrane protein.
     
 0.433
RSc2632
Probable atp-binding abc transporter protein.
 
     0.419
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.