STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUProbable urocanate hydratase (urocanase) (imidazolonepropionatehydrolase) protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (601 aa)    
Predicted Functional Partners:
hutI
Probable imidazolonepropionase (imidazolone-5-propionatehydrolase). transmembrane protein; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.999
hutH1
Probable histidine ammonia-lyase (histidase) protein; Belongs to the PAL/histidase family.
 
 0.999
hutH2
Probable histidine ammonia-lyase protein.
 
 0.995
hutC
Probable histidine utilization repressor transcription regulator protein.
 
  
 0.913
hutG
Probable formimidoylglutamase (formiminoglutamase)(formiminoglutamate hydrolase) protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
  
 0.896
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.665
RSc2522
Hypothetical protein of unknown function duf886.
 
  
 0.643
hslR
Putative heat shock protein 15.
       0.568
hemH
Probable ferrochelatase (protoheme ferro-lyase) (hemesynthetase) protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.568
tolR
Putative tolr-related transport transmembrane protein.
      
 0.564
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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