STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutCProbable histidine utilization repressor transcription regulator protein. (237 aa)    
Predicted Functional Partners:
hutI
Probable imidazolonepropionase (imidazolone-5-propionatehydrolase). transmembrane protein; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.935
hutU
Probable urocanate hydratase (urocanase) (imidazolonepropionatehydrolase) protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.913
RSp0336
Probable transcription regulator protein.
  
   
 0.910
hutH1
Probable histidine ammonia-lyase (histidase) protein; Belongs to the PAL/histidase family.
 
  
 0.884
RSc2522
Hypothetical protein of unknown function duf886.
 
  
 0.859
pdxJ
Probable pyridoxal phosphate biosynthetic protein pdxj (pnp synthase); Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
      
 0.786
hutG
Probable formimidoylglutamase (formiminoglutamase)(formiminoglutamate hydrolase) protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
  
 0.668
hutH2
Probable histidine ammonia-lyase protein.
 
  
 0.601
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
     
 0.537
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
  
  
 0.518
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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