STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2665Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
dld
Putative d-lactate dehydrogenase (cytochrome) oxidoreductase protein.
       0.757
RSc1472
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.752
RSp0308
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.705
RSp1237
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.643
RSp0018
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.573
RSc0214
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.558
RSc0804
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.549
RSp0662
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.547
RSc2663
Hypothetical cobalamin adenosyltransferase protein; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.526
RSc2497
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.524
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.